Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter atp-binding protein | SHEW_RS05005 | Not Available | Positive | 1118906 - 1120042 | 42219.9 |
| abc transporter permease subunit | SHEW_RS05010 | Not Available | Positive | 1120053 - 1120958 | 33775.5 |
| abc transporter permease subunit | SHEW_RS05015 | Not Available | Positive | 1120955 - 1121782 | 30343.9 |
| nad(p)/fad-dependent oxidoreductase | SHEW_RS05020 | Not Available | Positive | 1121866 - 1123152 | 46360.6 |
| spfh domain-containing protein | SHEW_RS05025 | Not Available | Negative | 1123249 - 1124187 | 34899.9 |
| eal domain-containing protein | SHEW_RS05030 | Not Available | Negative | 1124320 - 1126770 | 90922.4 |
| atp-binding protein | SHEW_RS05035 | Not Available | Positive | 1127012 - 1130527 | 130566.0 |
| response regulator | SHEW_RS05040 | Not Available | Positive | 1130561 - 1131028 | 17558.5 |
| m20 family peptidase | SHEW_RS05045 | Not Available | Positive | 1131481 - 1133007 | 56494.4 |
| metal-dependent hydrolase family protein | SHEW_RS05050 | Not Available | Positive | 1133264 - 1134601 | 48629.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
