Pseudoduganella plicata str. DSM 17505

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella plicata
StrainDSM 17505

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella plicata strain DSM 17505 chromosome, complete

Gene Summary

Adenine Count

1031684 bp

Thymine Count

1026837 bp

Guanine Count

1915602 bp

Cytosine Count

1913499 bp

Genome Length

5887622 bp

Protein-coding Genes

5175 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cbta family proteinE1742_RS01320Not AvailablePositive320684 - 32147527743.5
(2fe-2s) ferredoxin domain-containing proteinE1742_RS01325Not AvailablePositive321479 - 32181712453.0
cobaltochelatase subunit cobnE1742_RS01330Not AvailablePositive321810 - 325853146198.0
putative cobaltochelataseE1742_RS01335Not AvailablePositive325850 - 32774566592.7
cobalt-precorrin-7 (c(5))-methyltransferaseE1742_RS01340Not AvailablePositive327764 - 32846225649.9
precorrin-8x methylmutaseE1742_RS01345Not AvailablePositive328459 - 33003056685.4
cobalt-precorrin-5b (c(1))-methyltransferase cbidE1742_RS01350Not AvailablePositive330017 - 33114739722.0
precorrin-2 c(20)-methyltransferaseE1742_RS01355Not AvailablePositive331144 - 33189627142.8
precorrin-4 c(11)-methyltransferaseE1742_RS01360Not AvailablePositive331893 - 33266927927.9
cobalamin biosynthesis proteinE1742_RS01365Not AvailablePositive332672 - 33343326607.2

Displaying genes 271 – 280 of 5283 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.