Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN05216248_101675 | Not Available | Negative | 704265 - 705329 | 39262.9 |
| hypothetical protein | SAMN05216248_101676 | Not Available | Negative | 705501 - 705719 | 8012.88 |
| hypothetical protein | SAMN05216248_101677 | Not Available | Negative | 705742 - 706050 | 11653.9 |
| hypothetical protein | SAMN05216248_101678 | Not Available | Negative | 706127 - 706354 | 8212.03 |
| Hypothetical protein | SAMN05216248_101679 | Not Available | Negative | 706359 - 707192 | 31255.2 |
| Hypothetical protein | SAMN05216248_101680 | Not Available | Positive | 707299 - 707526 | 7964.55 |
| hypothetical protein | SAMN05216248_101681 | Not Available | Positive | 707577 - 708191 | 22803.9 |
| Putative dna-binding protein (roi) | SAMN05216248_101682 | Not Available | Positive | 708261 - 709061 | 30344.2 |
| Pyocin large subunit | SAMN05216248_101683 | Not Available | Positive | 709061 - 709855 | 29914.9 |
| Putative replication protein p | SAMN05216248_101684 | Not Available | Positive | 709852 - 710565 | 26332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
