Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN05216248_101800 | Not Available | Positive | 815340 - 816134 | 28990.2 |
| glutathione s-transferase | SAMN05216248_101801 | Not Available | Positive | 816325 - 816945 | 21948.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101802 | Not Available | Positive | 816964 - 817884 | 33338.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101803 | Not Available | Positive | 817884 - 818768 | 32371.0 |
| hypothetical protein | SAMN05216248_101804 | Not Available | Positive | 818848 - 819780 | 33936.5 |
| hypothetical protein | SAMN05216248_101805 | Not Available | Negative | 819755 - 820231 | 16834.2 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05216248_101806 | Not Available | Positive | 821214 - 822554 | 47168.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05216248_101807 | Not Available | Positive | 822643 - 823065 | 15255.2 |
| phenylacetaldehyde dehydrogenase | SAMN05216248_101808 | Not Available | Negative | 823040 - 824527 | 53199.8 |
| acyl-coa dehydrogenase | SAMN05216248_101809 | Not Available | Positive | 824764 - 825933 | 42895.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
