Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein d | SAMN05216248_101790 | Not Available | Positive | 804792 - 806903 | 75573.9 |
| cytochrome c | SAMN05216248_101791 | Not Available | Negative | 807071 - 807448 | 13754.8 |
| protein of unknown function | SAMN05216248_101792 | Not Available | Positive | 807680 - 808072 | 13885.0 |
| outer membrane protein ompa | SAMN05216248_101793 | Not Available | Positive | 808083 - 808856 | 28032.2 |
| acid phosphatase | SAMN05216248_101794 | Not Available | Negative | 808902 - 809726 | 30680.3 |
| hypothetical protein | SAMN05216248_101795 | Not Available | Negative | 809823 - 811751 | 72093.2 |
| hypothetical protein | SAMN05216248_101796 | Not Available | Positive | 811849 - 812421 | 21335.5 |
| protein of unknown function | SAMN05216248_101797 | Not Available | Negative | 812400 - 813608 | 45068.9 |
| hypothetical protein | SAMN05216248_101798 | Not Available | Negative | 813789 - 814502 | 27133.3 |
| putative abc transport system atp-binding protein | SAMN05216248_101799 | Not Available | Positive | 814666 - 815343 | 24667.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
