Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, gntr family | SAMN05216248_101770 | Not Available | Positive | 785933 - 786601 | 25024.1 |
| polar amino acid transport system substrate-binding protein | SAMN05216248_101771 | Not Available | Positive | 786679 - 787485 | 29334.4 |
| polar amino acid transport system permease protein | SAMN05216248_101772 | Not Available | Positive | 787497 - 788273 | 28700.0 |
| polar amino acid transport system atp-binding protein | SAMN05216248_101773 | Not Available | Positive | 788276 - 789055 | 28595.9 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05216248_101774 | Not Available | Positive | 789092 - 790702 | 57950.7 |
| iron complex outermembrane recepter protein | SAMN05216248_101775 | Not Available | Positive | 790787 - 793177 | 86310.5 |
| iron complex transport system substrate-binding protein | SAMN05216248_101776 | Not Available | Positive | 793402 - 794322 | 32726.2 |
| iron complex transport system permease protein | SAMN05216248_101777 | Not Available | Positive | 794325 - 795314 | 33562.0 |
| iron complex transport system permease protein | SAMN05216248_101778 | Not Available | Positive | 795311 - 796279 | 33586.4 |
| iron complex transport system atp-binding protein | SAMN05216248_101779 | Not Available | Positive | 796284 - 797075 | 28398.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
