Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05216248_101760 | Not Available | Negative | 774732 - 775583 | 31034.2 |
| carotenoid cleavage dioxygenase | SAMN05216248_101761 | Not Available | Negative | 775814 - 777259 | 54020.1 |
| predicted arabinose efflux permease, mfs family | SAMN05216248_101762 | Not Available | Negative | 777295 - 778476 | 40787.4 |
| uncharacterized conserved protein | SAMN05216248_101763 | Not Available | Negative | 778492 - 779484 | 36376.6 |
| hypothetical protein | SAMN05216248_101764 | Not Available | Negative | 779703 - 780122 | 14558.7 |
| hypothetical protein | SAMN05216248_101765 | Not Available | Negative | 780125 - 780559 | 14865.4 |
| beta-barrel assembly machine subunit bama | SAMN05216248_101766 | Not Available | Negative | 780638 - 783004 | 86601.6 |
| two-component system, ompr family, response regulator cpxr | SAMN05216248_101767 | Not Available | Positive | 783192 - 783875 | 24874.2 |
| signal transduction histidine kinase | SAMN05216248_101768 | Not Available | Positive | 783872 - 785155 | 47125.1 |
| hypothetical protein | SAMN05216248_101769 | Not Available | Positive | 785277 - 785654 | 13926.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
