Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | SAMN05216248_101750 | Not Available | Negative | 763527 - 765041 | 53718.1 |
| putative meta-pathway of phenol degradation | SAMN05216248_101751 | Not Available | Negative | 765231 - 766097 | 31806.2 |
| aldoxime dehydratase | SAMN05216248_101752 | Not Available | Negative | 766181 - 767239 | 40055.0 |
| hypothetical protein | SAMN05216248_101753 | Not Available | Negative | 767282 - 767443 | 6629.99 |
| helix-turn-helix domain-containing protein | SAMN05216248_101754 | Not Available | Positive | 767803 - 768738 | 35102.7 |
| arac-type dna-binding protein | SAMN05216248_101755 | Not Available | Negative | 768751 - 769749 | 37779.8 |
| aldehyde dehydrogenase (nad+) | SAMN05216248_101756 | Not Available | Negative | 769822 - 771300 | 53116.5 |
| catechol-2,3-dioxygenase | SAMN05216248_101757 | Not Available | Negative | 771371 - 772219 | 31821.4 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05216248_101758 | Not Available | Negative | 772242 - 773888 | 60093.6 |
| transcriptional regulator, iclr family | SAMN05216248_101759 | Not Available | Negative | 773910 - 774728 | 30719.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
