Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein, multidrug efflux system | SAMN05216248_101740 | Not Available | Positive | 753176 - 754570 | 50106.0 |
| phospholipid-binding lipoprotein mlaa | SAMN05216248_101741 | Not Available | Positive | 754656 - 755357 | 25362.4 |
| alcohol dehydrogenase | SAMN05216248_101742 | Not Available | Negative | 755494 - 756534 | 37023.5 |
| dna-binding transcriptional regulator, lrp family | SAMN05216248_101743 | Not Available | Positive | 756719 - 757201 | 18152.0 |
| transcriptional regulator, tetr family | SAMN05216248_101744 | Not Available | Negative | 757257 - 757751 | 18449.9 |
| acetyl-coa synthetase | SAMN05216248_101745 | Not Available | Negative | 757879 - 759519 | 60321.9 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | SAMN05216248_101746 | Not Available | Negative | 759589 - 760881 | 48096.7 |
| gtpase, g3e family | SAMN05216248_101747 | Not Available | Negative | 760900 - 762159 | 46910.8 |
| nitrile hydratase | SAMN05216248_101748 | Not Available | Negative | 762156 - 762818 | 24532.9 |
| nitrile hydratase | SAMN05216248_101749 | Not Available | Negative | 762860 - 763453 | 22046.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
