Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101670 | Not Available | Negative | 701330 - 701527 | 7140.31 |
| protein of unknown function | SAMN05216248_101671 | Not Available | Positive | 702325 - 702636 | 11649.5 |
| hypothetical protein | SAMN05216248_101672 | Not Available | Negative | 702686 - 703189 | 18597.1 |
| hypothetical protein | SAMN05216248_101673 | Not Available | Negative | 703255 - 703473 | 7744.19 |
| hypothetical protein | SAMN05216248_101674 | Not Available | Negative | 703671 - 704258 | 21182.4 |
| two-component system, ompr family, sensor histidine kinase baes | SAMN05216248_101737 | Not Available | Negative | 747328 - 748713 | 50838.5 |
| membrane fusion protein, multidrug efflux system | SAMN05216248_101738 | Not Available | Positive | 748858 - 750042 | 41378.4 |
| hydrophobic/amphiphilic exporter-1, hae1 family/multidrug efflux pump | SAMN05216248_101739 | Not Available | Positive | 750045 - 753179 | 110582.0 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 750302 - 750417 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 750573 - 750639 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
