Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101660 | Not Available | Negative | 696081 - 696392 | 11580.7 |
| hypothetical protein | SAMN05216248_101661 | Not Available | Negative | 696462 - 696932 | 17167.6 |
| hypothetical protein | SAMN05216248_101662 | Not Available | Negative | 696929 - 697171 | 9003.96 |
| putative phage-type endonuclease | SAMN05216248_101663 | Not Available | Negative | 697168 - 698793 | 58317.7 |
| phage recombination protein bet | SAMN05216248_101664 | Not Available | Negative | 698790 - 699608 | 29821.5 |
| large subunit ribosomal protein l36 | SAMN05216248_101665 | Not Available | Positive | 699732 - 699893 | 6099.6 |
| hypothetical protein | SAMN05216248_101666 | Not Available | Negative | 699894 - 700085 | 7241.51 |
| hypothetical protein | SAMN05216248_101667 | Not Available | Negative | 700443 - 700658 | 7915.41 |
| hypothetical protein | SAMN05216248_101668 | Not Available | Negative | 700655 - 701092 | 16324.1 |
| hypothetical protein | SAMN05216248_101669 | Not Available | Negative | 701111 - 701308 | 7512.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
