Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN05216248_101650 | Not Available | Negative | 687701 - 688879 | 44928.3 |
| hypothetical protein | SAMN05216248_101651 | Not Available | Negative | 689139 - 689357 | 7714.74 |
| hypothetical protein | SAMN05216248_101652 | Not Available | Negative | 689400 - 689759 | 13503.9 |
| hypothetical protein | SAMN05216248_101653 | Not Available | Positive | 689890 - 690132 | 8842.53 |
| dna modification methylase | SAMN05216248_101654 | Not Available | Negative | 690166 - 691260 | 40562.5 |
| hypothetical protein | SAMN05216248_101655 | Not Available | Negative | 692107 - 692745 | 23362.3 |
| hypothetical protein | SAMN05216248_101656 | Not Available | Positive | 692830 - 693066 | 8963.8 |
| hypothetical protein | SAMN05216248_101657 | Not Available | Positive | 693206 - 693322 | 4344.85 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05216248_101658 | Not Available | Negative | 693326 - 695419 | 74963.8 |
| hypothetical protein | SAMN05216248_101659 | Not Available | Positive | 695509 - 696066 | 20319.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
