Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_102505 | Not Available | Positive | 1781562 - 1783022 | 50856.7 |
| Putative tail protein | SAMN05216248_102506 | Not Available | Positive | 1783022 - 1783405 | 13628.5 |
| Phage tail x | SAMN05216248_102507 | Not Available | Positive | 1783398 - 1783610 | 7714.15 |
| Tail protein | SAMN05216248_102508 | Not Available | Positive | 1783620 - 1784627 | 36740.8 |
| Lysozyme | SAMN05216248_102509 | Not Available | Positive | 1784634 - 1785191 | 20534.7 |
| Rz | SAMN05216248_102510 | Not Available | Positive | 1785155 - 1785649 | 17561.1 |
| nicotinamide-nucleotide amidase | SAMN05216248_102511 | Not Available | Positive | 1785731 - 1786231 | 17684.0 |
| Dna strand exchange and recombination protein with protease and nuclease activity | SAMN05216248_102512 | Not Available | Positive | 1786316 - 1787374 | 37582.4 |
| regulatory protein | SAMN05216248_102513 | Not Available | Positive | 1787428 - 1787850 | 16331.5 |
| Hypothetical protein | SAMN05216248_102514 | Not Available | Negative | 1787913 - 1789025 | 41722.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
