Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101639 | Not Available | Negative | 679484 - 679798 | 10756.8 |
| threonyl-trna synthetase | SAMN05216248_101640 | Not Available | Positive | 680166 - 682088 | 72587.6 |
| bacterial translation initiation factor 3 (bif-3) | SAMN05216248_101641 | Not Available | Positive | 682106 - 682639 | 20080.6 |
| lsu ribosomal protein l35p | SAMN05216248_101643 | Not Available | Positive | 682700 - 682894 | 7368.38 |
| lsu ribosomal protein l20p | SAMN05216248_101644 | Not Available | Positive | 682925 - 683281 | 13314.6 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05216248_101645 | Not Available | Positive | 683390 - 684406 | 37950.6 |
| phenylalanyl-trna synthetase beta subunit | SAMN05216248_101646 | Not Available | Positive | 684433 - 686811 | 86483.9 |
| integration host factor subunit alpha | SAMN05216248_101647 | Not Available | Positive | 686815 - 687117 | 11476.8 |
| transcriptional regulator, merr family | SAMN05216248_101648 | Not Available | Positive | 687098 - 687454 | 13928.9 |
| Trna-pro | Not Available | Not Available | Positive | 687545 - 687618 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
