Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05216248_101629 | Not Available | Positive | 671772 - 673325 | 55577.4 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05216248_101630 | Not Available | Positive | 673322 - 674299 | 33447.7 |
| transcriptional regulator, laci family | SAMN05216248_101631 | Not Available | Positive | 674303 - 675325 | 36668.2 |
| ribokinase | SAMN05216248_101632 | Not Available | Positive | 675349 - 676266 | 30799.7 |
| d-ribose pyranase | SAMN05216248_101633 | Not Available | Positive | 676263 - 676667 | 14474.8 |
| purine nucleosidase | SAMN05216248_101634 | Not Available | Positive | 676693 - 677721 | 36831.5 |
| hypothetical protein | SAMN05216248_101635 | Not Available | Negative | 677755 - 677967 | 7627.01 |
| hypothetical protein | SAMN05216248_101636 | Not Available | Positive | 678084 - 678446 | 13253.7 |
| peptidase inhibitor i78 family protein | SAMN05216248_101637 | Not Available | Positive | 678591 - 678908 | 11188.3 |
| cold-shock dna-binding protein family | SAMN05216248_101638 | Not Available | Negative | 678982 - 679194 | 7656.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
