Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216248_101619 | Not Available | Negative | 664631 - 665401 | 27123.3 |
| sugar-phosphatase | SAMN05216248_101620 | Not Available | Positive | 665609 - 666286 | 24250.0 |
| hypothetical protein | SAMN05216248_101621 | Not Available | Negative | 666306 - 666599 | 10590.5 |
| hypothetical protein | SAMN05216248_101622 | Not Available | Negative | 666695 - 666934 | 8760.99 |
| carbon storage regulator, csra | SAMN05216248_101623 | Not Available | Negative | 667146 - 667340 | 6967.47 |
| hypothetical protein | SAMN05216248_101624 | Not Available | Positive | 667588 - 667968 | 13521.3 |
| deoxyribonuclease-1 | SAMN05216248_101625 | Not Available | Negative | 667999 - 668688 | 26317.6 |
| protein of unknown function | SAMN05216248_101626 | Not Available | Negative | 668693 - 668944 | 9298.9 |
| glutamin-(asparagin-)ase | SAMN05216248_101627 | Not Available | Negative | 669116 - 670204 | 38718.7 |
| ribose transport system substrate-binding protein | SAMN05216248_101628 | Not Available | Positive | 670758 - 671714 | 33348.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
