Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 658227 - 658300 | Not Available |
| regulator rcnb of ni and co efflux | SAMN05216248_101610 | Not Available | Positive | 658562 - 659023 | 15774.8 |
| hypothetical protein | SAMN05216248_101611 | Not Available | Negative | 659020 - 659268 | 9059.98 |
| uncharacterized membrane protein | SAMN05216248_101612 | Not Available | Positive | 659484 - 660200 | 25950.7 |
| uncharacterized membrane protein | SAMN05216248_101613 | Not Available | Positive | 660197 - 661147 | 33511.8 |
| pyroglutamyl-peptidase | SAMN05216248_101614 | Not Available | Positive | 661155 - 661796 | 22470.1 |
| hypothetical protein | SAMN05216248_101615 | Not Available | Negative | 661812 - 662036 | 8058.97 |
| two-component system, ompr family, heavy metal sensor histidine kinase cuss | SAMN05216248_101616 | Not Available | Negative | 662163 - 663563 | 51477.4 |
| two component heavy metal response transcriptional regulator, winged helix family | SAMN05216248_101617 | Not Available | Negative | 663560 - 664231 | 25455.8 |
| protein of unknown function | SAMN05216248_101618 | Not Available | Negative | 664274 - 664519 | 8688.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
