Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN05216248_101599 | Not Available | Positive | 649696 - 651003 | 47385.7 |
| dedd protein | SAMN05216248_101600 | Not Available | Positive | 650987 - 651649 | 23395.2 |
| membrane protein required for colicin v production | SAMN05216248_101601 | Not Available | Positive | 651907 - 652464 | 19803.7 |
| amidophosphoribosyltransferase | SAMN05216248_101602 | Not Available | Positive | 652506 - 654011 | 55359.3 |
| o-succinylhomoserine sulfhydrylase | SAMN05216248_101603 | Not Available | Positive | 654077 - 655288 | 43247.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216248_101604 | Not Available | Positive | 655300 - 656064 | 26611.8 |
| Trna-val | Not Available | Not Available | Positive | 656172 - 656244 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 656303 - 656376 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 656485 - 656558 | Not Available |
| gamma-glutamylputrescine oxidase | SAMN05216248_101608 | Not Available | Negative | 656759 - 658042 | 46424.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
