Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase, large subunit | SAMN05216248_101589 | Not Available | Positive | 637572 - 638990 | 50659.5 |
| 3-isopropylmalate dehydratase, small subunit | SAMN05216248_101590 | Not Available | Positive | 639001 - 639645 | 24326.6 |
| methyltransferase domain-containing protein | SAMN05216248_101591 | Not Available | Positive | 639808 - 640572 | 28003.2 |
| 3-isopropylmalate dehydrogenase | SAMN05216248_101592 | Not Available | Positive | 640626 - 641708 | 38777.8 |
| aspartate semialdehyde dehydrogenase | SAMN05216248_101593 | Not Available | Positive | 641773 - 642885 | 40627.3 |
| aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | SAMN05216248_101594 | Not Available | Positive | 643137 - 644147 | 35273.5 |
| pilus assembly protein fimv | SAMN05216248_101595 | Not Available | Positive | 644310 - 646871 | 90155.7 |
| trna pseudouridine38-40 synthase | SAMN05216248_101596 | Not Available | Positive | 646983 - 647837 | 31780.2 |
| phosphoribosylanthranilate isomerase | SAMN05216248_101597 | Not Available | Positive | 647902 - 648534 | 22128.5 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05216248_101598 | Not Available | Positive | 648779 - 649699 | 33439.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
