Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 625178 - 625250 | Not Available |
| transcriptional regulator, tetr family | SAMN05216248_101580 | Not Available | Positive | 625436 - 625975 | 19171.1 |
| esterase/lipase | SAMN05216248_101581 | Not Available | Positive | 625988 - 626824 | 30481.6 |
| acyl-coa thioester hydrolase | SAMN05216248_101582 | Not Available | Positive | 626864 - 627298 | 16430.7 |
| pp_00567 | SAMN05216248_101583 | Not Available | Positive | 627354 - 628331 | Not Available |
| hypothetical protein | SAMN05216248_101584 | Not Available | Positive | 628896 - 630158 | 45385.0 |
| hypothetical protein | SAMN05216248_101585 | Not Available | Positive | 630698 - 631189 | 17751.2 |
| hypothetical protein | SAMN05216248_101586 | Not Available | Positive | 631256 - 633181 | 68930.8 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05216248_101587 | Not Available | Negative | 633178 - 636474 | 123253.0 |
| transcriptional regulator, lysr family | SAMN05216248_101588 | Not Available | Negative | 636541 - 637431 | 32210.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
