Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system substrate-binding protein | SAMN05216248_101568 | Not Available | Negative | 612870 - 613880 | 36965.3 |
| endonuclease g | SAMN05216248_101570 | Not Available | Negative | 614216 - 615142 | 34789.0 |
| thermolysin metallopeptidase, catalytic domain | SAMN05216248_101571 | Not Available | Positive | 615271 - 616335 | 38905.9 |
| hypothetical protein | SAMN05216248_101572 | Not Available | Positive | 616350 - 616655 | 11164.3 |
| succinate-semialdehyde dehydrogenase | SAMN05216248_101573 | Not Available | Negative | 616716 - 618098 | 49105.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101574 | Not Available | Positive | 618203 - 619078 | 31817.4 |
| hypothetical protein | SAMN05216248_101575 | Not Available | Negative | 619075 - 619284 | 7452.15 |
| aromatic-amino-acid transaminase | SAMN05216248_101576 | Not Available | Negative | 619385 - 620581 | 43011.4 |
| excinuclease abc subunit b | SAMN05216248_101577 | Not Available | Positive | 620926 - 622941 | 76061.9 |
| glutamyl-trna synthetase | SAMN05216248_101578 | Not Available | Positive | 623148 - 624629 | 56138.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
