Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase (b12-independent) | SAMN05216248_101558 | Not Available | Negative | 605611 - 606639 | 38716.2 |
| protein of unknown function | SAMN05216248_101559 | Not Available | Negative | 606667 - 607650 | 37941.6 |
| hypothetical protein | SAMN05216248_101560 | Not Available | Positive | 607949 - 608182 | 7921.33 |
| hypothetical protein | SAMN05216248_101561 | Not Available | Positive | 608251 - 608820 | 21253.4 |
| tspo and mbr related proteins | SAMN05216248_101562 | Not Available | Positive | 608951 - 609391 | 16120.4 |
| acetyl esterase/lipase | SAMN05216248_101563 | Not Available | Positive | 609391 - 610317 | 33750.2 |
| hypothetical protein | SAMN05216248_101564 | Not Available | Positive | 610368 - 610592 | 8332.95 |
| l-amino acid n-acyltransferase ynca | SAMN05216248_101565 | Not Available | Positive | 610589 - 611086 | 18555.4 |
| iron complex transport system atp-binding protein | SAMN05216248_101566 | Not Available | Negative | 611108 - 611872 | 27655.5 |
| iron complex transport system permease protein | SAMN05216248_101567 | Not Available | Negative | 611869 - 612873 | 33790.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
