Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coenzyme a thioesterase paai, contains hgg motif | SAMN05216248_101548 | Not Available | Negative | 598309 - 598749 | 15512.8 |
| transcriptional regulator, tetr family | SAMN05216248_101549 | Not Available | Positive | 598885 - 599511 | 23336.6 |
| methylmalonyl-coa/ethylmalonyl-coa epimerase | SAMN05216248_101550 | Not Available | Negative | 599489 - 599944 | 17184.8 |
| glutathione s-transferase | SAMN05216248_101551 | Not Available | Positive | 600075 - 600701 | 23315.1 |
| uncharacterized conserved protein, conains n-terminal glutamine amidotransferase (gatase1)-like domain | SAMN05216248_101552 | Not Available | Positive | 600833 - 601555 | 25548.1 |
| hypothetical protein | SAMN05216248_101553 | Not Available | Negative | 601595 - 602842 | 44915.6 |
| hypothetical protein | SAMN05216248_101554 | Not Available | Negative | 602912 - 603274 | 13424.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101555 | Not Available | Negative | 603328 - 604191 | 31087.5 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05216248_101556 | Not Available | Positive | 604304 - 604912 | 21468.6 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05216248_101557 | Not Available | Negative | 605093 - 605611 | 18703.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
