Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenine22-n1)-methyltransferase | SAMN05216248_101538 | Not Available | Positive | 589406 - 590101 | 25668.9 |
| protein of unknown function | SAMN05216248_101539 | Not Available | Positive | 590141 - 590431 | 11142.0 |
| protein of unknown function | SAMN05216248_101540 | Not Available | Negative | 590448 - 591023 | 21088.0 |
| protein of unknown function | SAMN05216248_101541 | Not Available | Negative | 591083 - 591733 | 23127.9 |
| mor transcription activator family protein | SAMN05216248_101542 | Not Available | Negative | 591816 - 592199 | 14446.7 |
| toxin homologue of phage lysozyme | SAMN05216248_101543 | Not Available | Positive | 592364 - 592903 | 19402.1 |
| hypothetical protein | SAMN05216248_101544 | Not Available | Negative | 592950 - 593414 | 17055.3 |
| peptidyl-lys metalloendopeptidase | SAMN05216248_101545 | Not Available | Negative | 593488 - 594015 | 19701.9 |
| methyl-accepting chemotaxis protein | SAMN05216248_101546 | Not Available | Positive | 594332 - 596389 | 73266.0 |
| uncharacterized membrane protein, oligopeptide transporter (opt) family | SAMN05216248_101547 | Not Available | Positive | 596534 - 598270 | 60449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
