Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | SAMN05216248_101528 | Not Available | Positive | 579373 - 580203 | 29988.3 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05216248_101529 | Not Available | Positive | 580258 - 580989 | 26760.9 |
| uncharacterized conserved protein, ntn-hydrolase superfamily | SAMN05216248_101530 | Not Available | Positive | 580999 - 581673 | 23155.5 |
| acetylornithine deacetylase | SAMN05216248_101531 | Not Available | Positive | 581670 - 582827 | 41484.9 |
| acyl-coa dehydrogenase | SAMN05216248_101532 | Not Available | Negative | 582994 - 584235 | 44652.8 |
| nitt/taut family transport system substrate-binding protein | SAMN05216248_101533 | Not Available | Positive | 584477 - 585400 | 32966.5 |
| hypothetical protein | SAMN05216248_101534 | Not Available | Positive | 585436 - 585642 | 7655.57 |
| glucarate dehydratase | SAMN05216248_101535 | Not Available | Negative | 585644 - 586969 | 48433.8 |
| sugar phosphate permease | SAMN05216248_101536 | Not Available | Negative | 586989 - 588350 | 49281.5 |
| dna-binding transcriptional regulator, fadr family | SAMN05216248_101537 | Not Available | Positive | 588690 - 589409 | 26288.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
