Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05216248_101518 | Not Available | Negative | 569714 - 571108 | 52755.6 |
| protein of unknown function | SAMN05216248_101519 | Not Available | Negative | 571115 - 571633 | 19245.8 |
| predicted dienelactone hydrolase | SAMN05216248_101520 | Not Available | Negative | 571661 - 572698 | 36249.5 |
| peptide-methionine (s)-s-oxide reductase | SAMN05216248_101521 | Not Available | Positive | 572829 - 573335 | 19023.2 |
| putative flavoprotein involved in k+ transport | SAMN05216248_101522 | Not Available | Negative | 573409 - 574659 | 46007.7 |
| 3-dehydroquinate dehydratase | SAMN05216248_101523 | Not Available | Negative | 574680 - 575126 | 15933.0 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05216248_101524 | Not Available | Negative | 575144 - 575566 | 15700.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101525 | Not Available | Positive | 575750 - 576724 | 35509.9 |
| polar amino acid transport system permease protein | SAMN05216248_101526 | Not Available | Positive | 576928 - 578445 | 56105.1 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05216248_101527 | Not Available | Positive | 578472 - 579344 | 31812.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
