Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101508 | Not Available | Positive | 560829 - 561725 | 33496.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101509 | Not Available | Positive | 561735 - 562658 | 34141.9 |
| transcriptional regulator, tetr family | SAMN05216248_101510 | Not Available | Negative | 562561 - 563265 | 25142.9 |
| predicted arabinose efflux permease, mfs family | SAMN05216248_101511 | Not Available | Positive | 563387 - 564604 | 41942.4 |
| endonuclease g | SAMN05216248_101512 | Not Available | Positive | 564699 - 565493 | 28823.5 |
| hypothetical protein | SAMN05216248_101513 | Not Available | Positive | 565748 - 566230 | 17496.8 |
| hypothetical protein | SAMN05216248_101514 | Not Available | Positive | 566306 - 567265 | 37531.3 |
| hypothetical protein | SAMN05216248_101515 | Not Available | Positive | 567398 - 568609 | 42022.4 |
| protein of unknown function | SAMN05216248_101516 | Not Available | Negative | 568611 - 568772 | 5995.24 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMN05216248_101517 | Not Available | Positive | 568911 - 569726 | 28888.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
