Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-degrading monooxygenase hmoa | SAMN05216248_101498 | Not Available | Negative | 551295 - 551633 | 12724.2 |
| nadph:quinone reductase | SAMN05216248_101499 | Not Available | Negative | 551630 - 552610 | 34601.4 |
| arsr family transcriptional regulator | SAMN05216248_101500 | Not Available | Negative | 552672 - 552974 | 11180.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101501 | Not Available | Negative | 553043 - 553954 | 33877.2 |
| na+/h+-dicarboxylate symporter | SAMN05216248_101502 | Not Available | Positive | 554128 - 555390 | 44964.0 |
| aspartate racemase | SAMN05216248_101503 | Not Available | Positive | 555387 - 556838 | 52588.8 |
| molecular chaperone ibpa | SAMN05216248_101504 | Not Available | Positive | 556954 - 557412 | 16636.9 |
| proton glutamate symport protein | SAMN05216248_101505 | Not Available | Negative | 557465 - 558742 | 44538.2 |
| aspartate aminotransferase | SAMN05216248_101506 | Not Available | Negative | 558838 - 560043 | 43315.9 |
| regulator of rnase e activity rraa | SAMN05216248_101507 | Not Available | Negative | 560040 - 560705 | 23189.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
