Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101489 | Not Available | Positive | 545344 - 546240 | 32729.8 |
| hypothetical protein | SAMN05216248_101490 | Not Available | Negative | 546220 - 546300 | 3192.03 |
| Trna-asn | Not Available | Not Available | Positive | 546301 - 546373 | Not Available |
| hypothetical protein | SAMN05216248_101492 | Not Available | Negative | 546809 - 547123 | 11656.7 |
| hypothetical protein | SAMN05216248_101493 | Not Available | Positive | 547149 - 547382 | 8547.26 |
| hypothetical protein | SAMN05216248_101494 | Not Available | Positive | 547449 - 547658 | 8023.85 |
| hypothetical protein | SAMN05216248_101495 | Not Available | Positive | 547930 - 548196 | 9053.08 |
| Trna-asn | Not Available | Not Available | Positive | 548871 - 548943 | Not Available |
| lipopolysaccharide transport system atp-binding protein | SAMN05216248_101496 | Not Available | Positive | 549242 - 550573 | 47981.5 |
| sulfotransferase domain-containing protein | SAMN05216248_101497 | Not Available | Positive | 550578 - 551306 | 27516.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
