Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | SAMN05216248_101469 | Not Available | Negative | 504270 - 506270 | 72558.8 |
| c-terminal novel e3 ligase, lrr-interacting | SAMN05216248_101470 | Not Available | Positive | 506483 - 511330 | 180825.0 |
| polyphosphate:amp phosphotransferase | SAMN05216248_101471 | Not Available | Positive | 511433 - 512959 | 59109.8 |
| acetyl-coa acyltransferase | SAMN05216248_101472 | Not Available | Positive | 513051 - 514235 | 41980.2 |
| eama domain-containing membrane protein rard | SAMN05216248_101473 | Not Available | Positive | 514366 - 515322 | 34593.8 |
| fumarase, class ii | SAMN05216248_101474 | Not Available | Negative | 515319 - 516701 | 48745.5 |
| hypothetical protein | SAMN05216248_101475 | Not Available | Positive | 516895 - 517416 | 18814.8 |
| bola protein | SAMN05216248_101476 | Not Available | Positive | 517429 - 517722 | 10718.8 |
| insecticidal toxin complex protein tccc | SAMN05216248_101477 | Not Available | Positive | 517843 - 520836 | 109125.0 |
| insecticidal toxin complex protein tccc | SAMN05216248_101478 | Not Available | Positive | 520962 - 523694 | 101935.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
