Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101459 | Not Available | Positive | 494254 - 494784 | 18865.6 |
| phospholipase_d-nuclease n-terminal | SAMN05216248_101460 | Not Available | Positive | 494853 - 495044 | 6681.69 |
| phosphoglycerol transferase mdob | SAMN05216248_101461 | Not Available | Positive | 495340 - 497427 | 77392.7 |
| protein of unknown function | SAMN05216248_101462 | Not Available | Negative | 497482 - 497634 | 5290.14 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05216248_101463 | Not Available | Positive | 497973 - 498788 | 29503.9 |
| carbon storage regulator, csra | SAMN05216248_101464 | Not Available | Positive | 498918 - 499121 | 7311.93 |
| hypothetical protein | SAMN05216248_101465 | Not Available | Negative | 499130 - 499357 | 8598.27 |
| hydrolase, peptidase m42 family | SAMN05216248_101466 | Not Available | Negative | 499417 - 500601 | 42532.2 |
| gnat-family acetyltransferase tigr03103 | SAMN05216248_101467 | Not Available | Negative | 500626 - 502359 | 63418.5 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05216248_101468 | Not Available | Negative | 502363 - 504135 | 65439.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
