Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101449 | Not Available | Negative | 485066 - 485872 | 30618.6 |
| hypothetical protein | SAMN05216248_101450 | Not Available | Negative | 485972 - 486934 | 34099.5 |
| chorismate synthase | SAMN05216248_101451 | Not Available | Positive | 487078 - 488169 | 39037.5 |
| mfs transporter, ppp family, 3-phenylpropionic acid transporter | SAMN05216248_101452 | Not Available | Positive | 488243 - 489406 | 42609.8 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | SAMN05216248_101453 | Not Available | Positive | 489403 - 489933 | 19464.7 |
| regulatory protein, luxr family | SAMN05216248_101454 | Not Available | Positive | 490146 - 490415 | 10020.3 |
| protein of unknown function | SAMN05216248_101455 | Not Available | Negative | 490476 - 490754 | 10395.3 |
| citronellyl-coa synthetase | SAMN05216248_101456 | Not Available | Positive | 491107 - 492933 | 66892.0 |
| hypothetical protein | SAMN05216248_101457 | Not Available | Positive | 493043 - 493558 | 17825.4 |
| hypothetical protein | SAMN05216248_101458 | Not Available | Negative | 493581 - 493781 | 7757.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
