Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101735 | Not Available | Negative | 745787 - 746149 | 13282.7 |
| Putative dna-binding response regulator | SAMN05216248_101736 | Not Available | Negative | 746641 - 747324 | 25376.0 |
| Putative mismatch repair protein | SAMN05216248_102487 | Not Available | Negative | 1768594 - 1771233 | 97378.1 |
| Hypothetical protein | SAMN05216248_102488 | Not Available | Negative | 1771355 - 1771726 | 13481.0 |
| Hypothetical protein | SAMN05216248_102489 | Not Available | Negative | 1771719 - 1772207 | 18566.2 |
| Putative cro/ci transcriptional regulator | SAMN05216248_102490 | Not Available | Positive | 1772445 - 1773209 | 28691.1 |
| bacteriophage holin hol, superfamily iii | SAMN05216248_102491 | Not Available | Positive | 1773807 - 1774151 | 12145.0 |
| Putative phage-related protein | SAMN05216248_102492 | Not Available | Positive | 1774173 - 1774688 | 18423.8 |
| Putative baseplate assembly protein v | SAMN05216248_102493 | Not Available | Positive | 1774692 - 1775303 | 21617.5 |
| Putative baseplate assembly protein | SAMN05216248_102494 | Not Available | Positive | 1775313 - 1775645 | 12152.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
