Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoicase | SAMN05216248_101429 | Not Available | Negative | 463868 - 464863 | 36720.2 |
| ohcu decarboxylase | SAMN05216248_101430 | Not Available | Negative | 464905 - 465420 | 18891.4 |
| putative urate catabolism protein | SAMN05216248_101431 | Not Available | Negative | 465417 - 466343 | 35440.0 |
| 5-hydroxyisourate hydrolase | SAMN05216248_101432 | Not Available | Positive | 466740 - 467093 | 12867.1 |
| hypothetical protein | SAMN05216248_101433 | Not Available | Positive | 467335 - 472482 | 191728.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05216248_101434 | Not Available | Negative | 472469 - 473104 | 22727.2 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN05216248_101435 | Not Available | Negative | 473118 - 474464 | 47023.7 |
| dna-binding transcriptional regulator, marr family | SAMN05216248_101436 | Not Available | Negative | 474640 - 475071 | 16320.7 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05216248_101437 | Not Available | Positive | 475153 - 476319 | 43004.7 |
| glutathione s-transferase | SAMN05216248_101438 | Not Available | Positive | 476330 - 476932 | 22998.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
