Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division topological specificity factor mine | SAMN05216248_101419 | Not Available | Negative | 454920 - 455174 | 9551.5 |
| septum site-determining protein mind | SAMN05216248_101420 | Not Available | Negative | 455178 - 455990 | 29248.2 |
| septum site-determining protein minc | SAMN05216248_101421 | Not Available | Negative | 456157 - 456894 | 26255.1 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05216248_101422 | Not Available | Positive | 457014 - 457949 | 35975.9 |
| nte family protein | SAMN05216248_101423 | Not Available | Positive | 457980 - 459113 | 40011.4 |
| nucleoside-specific outer membrane channel protein tsx | SAMN05216248_101424 | Not Available | Negative | 459145 - 459930 | 29783.8 |
| hypothetical protein | SAMN05216248_101425 | Not Available | Negative | 459954 - 460322 | 13404.9 |
| nucleobase:cation symporter-2, ncs2 family | SAMN05216248_101426 | Not Available | Negative | 460367 - 461713 | 46604.3 |
| uncharacterized membrane protein | SAMN05216248_101427 | Not Available | Negative | 461896 - 463173 | 46229.3 |
| ureidoglycolate lyase | SAMN05216248_101428 | Not Available | Negative | 463240 - 463743 | 18730.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
