Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216248_101409 | Not Available | Positive | 443918 - 444598 | 24585.4 |
| signal transduction histidine kinase | SAMN05216248_101410 | Not Available | Positive | 444595 - 445917 | 48148.3 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05216248_101411 | Not Available | Positive | 446042 - 446815 | 29074.2 |
| diaminobutyrate-2-oxoglutarate transaminase | SAMN05216248_101412 | Not Available | Positive | 446957 - 448351 | 49937.8 |
| mbth protein | SAMN05216248_101413 | Not Available | Positive | 448434 - 448658 | 8524.18 |
| amidohydrolase | SAMN05216248_101414 | Not Available | Negative | 448784 - 450130 | 47841.4 |
| small-conductance mechanosensitive channel | SAMN05216248_101415 | Not Available | Negative | 450148 - 452313 | 79589.2 |
| hypothetical protein | SAMN05216248_101416 | Not Available | Negative | 452366 - 452542 | 6414.52 |
| aspartyl aminopeptidase | SAMN05216248_101417 | Not Available | Negative | 452727 - 454016 | 46947.8 |
| ribosomal large subunit pseudouridine synthase a | SAMN05216248_101418 | Not Available | Negative | 454188 - 454823 | 24092.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
