Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216248_101399 | Not Available | Negative | 419483 - 421261 | 63164.0 |
| transcriptional regulator, tetr family | SAMN05216248_101400 | Not Available | Positive | 421415 - 422038 | 23180.0 |
| abc-type amino acid transport substrate-binding protein | SAMN05216248_101401 | Not Available | Positive | 422133 - 422921 | 29700.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216248_101402 | Not Available | Negative | 422964 - 423515 | 20627.7 |
| surfactin synthase thioesterase subunit | SAMN05216248_101403 | Not Available | Positive | 423818 - 424570 | 27873.8 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN05216248_101404 | Not Available | Positive | 424626 - 437507 | 476595.0 |
| hypothetical protein | SAMN05216248_101405 | Not Available | Positive | 437657 - 440368 | 100020.0 |
| thiol:disulfide interchange protein dsbc | SAMN05216248_101406 | Not Available | Negative | 440440 - 441201 | 27448.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN05216248_101407 | Not Available | Negative | 441177 - 442028 | 30651.6 |
| thiol:disulfide interchange protein dsbd | SAMN05216248_101408 | Not Available | Negative | 442029 - 443756 | 61453.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
