Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101389 | Not Available | Negative | 409122 - 409571 | 16710.0 |
| chew protein | SAMN05216248_101390 | Not Available | Positive | 410111 - 411046 | 34833.8 |
| hypothetical protein | SAMN05216248_101391 | Not Available | Positive | 411086 - 411892 | 29392.3 |
| hypothetical protein | SAMN05216248_101392 | Not Available | Negative | 411959 - 412243 | 10162.0 |
| inhibitor of the kina pathway to sporulation, predicted exonuclease | SAMN05216248_101393 | Not Available | Negative | 412431 - 412973 | 20725.0 |
| geranyl-coa carboxylase alpha subunit | SAMN05216248_101394 | Not Available | Negative | 413047 - 414930 | 67950.3 |
| isohexenylglutaconyl-coa hydratase | SAMN05216248_101395 | Not Available | Negative | 415048 - 415809 | 27115.8 |
| citronellyl-coa dehydrogenase | SAMN05216248_101396 | Not Available | Negative | 415806 - 416963 | 42440.3 |
| geranyl-coa carboxylase beta subunit | SAMN05216248_101397 | Not Available | Negative | 416977 - 418593 | 57566.6 |
| citronellol/citronellal dehydrogenase | SAMN05216248_101398 | Not Available | Negative | 418597 - 419469 | 30504.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
