Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, chemotaxis family, response regulator cheb | SAMN05216248_101379 | Not Available | Positive | 400406 - 401533 | 39785.5 |
| chemotaxis protein mota | SAMN05216248_101380 | Not Available | Positive | 401533 - 402273 | 25932.0 |
| chemotaxis protein motb | SAMN05216248_101381 | Not Available | Positive | 402289 - 403176 | 31865.7 |
| chromosome partitioning protein | SAMN05216248_101382 | Not Available | Positive | 403228 - 404016 | 28282.3 |
| purine-binding chemotaxis protein chew | SAMN05216248_101383 | Not Available | Positive | 404016 - 404804 | 28920.9 |
| chew protein | SAMN05216248_101384 | Not Available | Positive | 404886 - 405368 | 17802.3 |
| protein of unknown function | SAMN05216248_101385 | Not Available | Positive | 405369 - 405761 | 14635.8 |
| lipid kinase yegs | SAMN05216248_101386 | Not Available | Positive | 406327 - 407247 | 32266.7 |
| two component transcriptional regulator, luxr family | SAMN05216248_101387 | Not Available | Negative | 407206 - 407865 | 23997.4 |
| signal transduction histidine kinase | SAMN05216248_101388 | Not Available | Negative | 407862 - 408752 | 32911.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
