Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 specific transcriptional regulator, flagellar regulatory protein a | SAMN05216248_101349 | Not Available | Positive | 371098 - 372573 | 55471.8 |
| two-component system, sensor histidine kinase flrb | SAMN05216248_101350 | Not Available | Positive | 372681 - 373895 | 44127.0 |
| two-component system, response regulator flrc | SAMN05216248_101351 | Not Available | Positive | 373903 - 375279 | 49896.6 |
| flagellar hook-basal body complex protein flie | SAMN05216248_101352 | Not Available | Positive | 375411 - 375740 | 11815.3 |
| flagellar m-ring protein flif | SAMN05216248_101353 | Not Available | Positive | 375757 - 377535 | 62911.7 |
| flagellar motor switch protein flig | SAMN05216248_101354 | Not Available | Positive | 377528 - 378547 | 37068.6 |
| flagellar assembly protein flih | SAMN05216248_101355 | Not Available | Positive | 378558 - 379322 | 28469.4 |
| flagellum-specific atp synthase | SAMN05216248_101356 | Not Available | Positive | 379312 - 380670 | 48433.9 |
| flagellar flij protein | SAMN05216248_101357 | Not Available | Positive | 380674 - 381123 | 17285.6 |
| anti-anti-sigma factor | SAMN05216248_101358 | Not Available | Positive | 381189 - 381494 | 11414.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
