Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN05216248_101725 | Not Available | Positive | 735837 - 736187 | 12426.0 |
| Tail assembly protein | SAMN05216248_101726 | Not Available | Positive | 736249 - 736860 | 20877.7 |
| Central tail fiber | SAMN05216248_101727 | Not Available | Positive | 736919 - 740482 | 128843.0 |
| Hypothetical protein | SAMN05216248_101728 | Not Available | Positive | 740821 - 741450 | 22318.1 |
| Tail fiber protein | SAMN05216248_101729 | Not Available | Positive | 741507 - 742547 | 35625.9 |
| Hypothetical protein | SAMN05216248_101730 | Not Available | Positive | 742905 - 743117 | 7748.97 |
| Glycoside hydrolase family 19 protein | SAMN05216248_101731 | Not Available | Positive | 743172 - 743705 | 19342.3 |
| Lysozyme | SAMN05216248_101732 | Not Available | Positive | 743702 - 744220 | 18365.9 |
| Dna adenine methylase gp25 | SAMN05216248_101733 | Not Available | Positive | 744288 - 745082 | 30655.6 |
| Hypothetical protein | SAMN05216248_101734 | Not Available | Negative | 745079 - 745759 | 25208.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
