Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine efflux transporter rhta | SAMN05216248_101329 | Not Available | Negative | 349612 - 350496 | 30654.5 |
| arac-type dna-binding protein | SAMN05216248_101330 | Not Available | Negative | 350596 - 351345 | 27470.2 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN05216248_101331 | Not Available | Positive | 351483 - 352292 | 30989.2 |
| aromatic-amino-acid transaminase | SAMN05216248_101332 | Not Available | Negative | 352357 - 353550 | 42837.2 |
| pterin-4-alpha-carbinolamine dehydratase | SAMN05216248_101333 | Not Available | Negative | 353550 - 353906 | 13365.9 |
| phenylalanine 4-hydroxylase | SAMN05216248_101334 | Not Available | Negative | 354004 - 354795 | 30265.5 |
| transcriptional regulator, tyrr | SAMN05216248_101335 | Not Available | Positive | 355053 - 356615 | 57042.3 |
| flagellar basal-body rod protein flgf | SAMN05216248_101336 | Not Available | Positive | 356858 - 357598 | 26249.4 |
| flagellar basal-body rod protein flgg | SAMN05216248_101337 | Not Available | Positive | 357670 - 358455 | 27501.3 |
| flagellar l-ring protein precursor flgh | SAMN05216248_101338 | Not Available | Positive | 358509 - 359204 | 24162.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
