Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | SAMN05216248_101319 | Not Available | Positive | 337468 - 338961 | 56063.5 |
| na+/proline symporter | SAMN05216248_101320 | Not Available | Negative | 339008 - 342478 | 126689.0 |
| hypothetical protein | SAMN05216248_101321 | Not Available | Negative | 342593 - 342976 | 14208.0 |
| uncharacterized protein | SAMN05216248_101322 | Not Available | Negative | 342997 - 343584 | 21871.6 |
| hypothetical protein | SAMN05216248_101323 | Not Available | Negative | 343673 - 343798 | 4640.6 |
| atp-dependent dna helicase recq | SAMN05216248_101324 | Not Available | Positive | 343851 - 345977 | 79156.4 |
| transcriptional regulator, marr family | SAMN05216248_101325 | Not Available | Positive | 346099 - 346533 | 16212.8 |
| nte family protein | SAMN05216248_101326 | Not Available | Negative | 346595 - 348784 | 80843.5 |
| selenoprotein w-related protein | SAMN05216248_101327 | Not Available | Positive | 348869 - 349156 | 10731.8 |
| hypothetical protein | SAMN05216248_101328 | Not Available | Negative | 349198 - 349479 | 9012.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
