Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 330778 - 330815 | 18.01 |
| dna-binding transcriptional regulator, marr family | SAMN05216248_101310 | Not Available | Positive | 331019 - 331423 | 14605.6 |
| nitrate/nitrite transporter nark | SAMN05216248_101311 | Not Available | Positive | 331479 - 332687 | 42725.4 |
| hypothetical protein | SAMN05216248_101312 | Not Available | Positive | 332684 - 332803 | 4193.45 |
| glutathione peroxidase | SAMN05216248_101313 | Not Available | Positive | 332853 - 333404 | 20055.4 |
| long-chain fatty acid transport protein | SAMN05216248_101314 | Not Available | Negative | 333470 - 334759 | 45790.7 |
| hypothetical protein | SAMN05216248_101315 | Not Available | Negative | 334906 - 335388 | 17930.7 |
| hypothetical protein | SAMN05216248_101316 | Not Available | Negative | 335666 - 335890 | 8304.0 |
| hypothetical protein | SAMN05216248_101317 | Not Available | Negative | 336335 - 336640 | 10189.9 |
| hypothetical protein | SAMN05216248_101318 | Not Available | Positive | 337098 - 337421 | 11913.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
