Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase | SAMN05216248_101301 | Not Available | Positive | 322695 - 324026 | 47473.2 |
| cob(ii)yrinic acid a,c-diamide reductase /5,6-dimethylbenzimidazole synthase | SAMN05216248_101302 | Not Available | Positive | 324023 - 324673 | 24268.4 |
| adenosylcobinamide-phosphate synthase | SAMN05216248_101303 | Not Available | Positive | 324670 - 325578 | 32832.6 |
| l-threonine o-3-phosphate decarboxylase | SAMN05216248_101304 | Not Available | Positive | 325571 - 326560 | 36716.4 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN05216248_101305 | Not Available | Positive | 326557 - 328008 | 51640.1 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN05216248_101306 | Not Available | Positive | 328100 - 328621 | 19024.2 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN05216248_101307 | Not Available | Positive | 328618 - 329673 | 36125.6 |
| alpha-ribazole phosphatase | SAMN05216248_101308 | Not Available | Positive | 329670 - 330245 | 20508.6 |
| cobalamin-5'-phosphate synthase | SAMN05216248_101309 | Not Available | Positive | 330248 - 330976 | 25356.3 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 330506 - 330621 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
