Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 313545 - 313660 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 313816 - 313866 | 18.01 |
| glycosyltransferase, gt2 family | SAMN05216248_101292 | Not Available | Negative | 311775 - 316112 | 161887.0 |
| hypothetical protein | SAMN05216248_101293 | Not Available | Negative | 316115 - 316906 | 29212.8 |
| hypothetical protein | SAMN05216248_101294 | Not Available | Negative | 316903 - 318048 | 44004.2 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05216248_101295 | Not Available | Negative | 318045 - 319280 | 44871.5 |
| regulatory inactivation of dnaa hda protein | SAMN05216248_101296 | Not Available | Positive | 319428 - 320132 | 26532.3 |
| nlpc/p60 family protein | SAMN05216248_101297 | Not Available | Positive | 320346 - 320975 | 22872.2 |
| cell wall-associated hydrolase, nlpc family | SAMN05216248_101298 | Not Available | Positive | 321120 - 321659 | 18997.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMN05216248_101300 | Not Available | Positive | 322087 - 322698 | 22457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
