Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN05216248_101282 | Not Available | Positive | 300759 - 302111 | 49569.9 |
| gtp pyrophosphokinase | SAMN05216248_101283 | Not Available | Positive | 302231 - 304474 | 83668.8 |
| atp diphosphatase | SAMN05216248_101284 | Not Available | Positive | 304627 - 305460 | 31484.0 |
| hypothetical protein | SAMN05216248_101285 | Not Available | Positive | 305486 - 306031 | 20687.7 |
| hypothetical protein | SAMN05216248_101286 | Not Available | Negative | 306173 - 306361 | 7223.38 |
| protein of unknown function | SAMN05216248_101287 | Not Available | Negative | 306739 - 307452 | 26193.3 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN05216248_101288 | Not Available | Negative | 307461 - 308111 | 23511.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN05216248_101289 | Not Available | Negative | 308111 - 309169 | 36989.8 |
| hypothetical protein | SAMN05216248_101290 | Not Available | Positive | 309524 - 310564 | 37278.1 |
| predicted purr-regulated permease perm | SAMN05216248_101291 | Not Available | Positive | 310596 - 311669 | 38745.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
