Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101272 | Not Available | Positive | 286381 - 287274 | 32441.3 |
| hypothetical protein | SAMN05216248_101273 | Not Available | Positive | 287417 - 287539 | 4772.85 |
| solute:na+ symporter, sss family | SAMN05216248_101274 | Not Available | Negative | 287818 - 289200 | 48793.5 |
| purine-cytosine permease | SAMN05216248_101275 | Not Available | Negative | 289235 - 290746 | 53675.4 |
| ketosteroid isomerase homolog | SAMN05216248_101276 | Not Available | Negative | 290768 - 291190 | 15775.5 |
| agmatinase | SAMN05216248_101277 | Not Available | Negative | 291190 - 292140 | 34304.4 |
| transcriptional regulator, lysr family | SAMN05216248_101278 | Not Available | Positive | 292290 - 293183 | 33345.4 |
| dtw domain-containing protein yfip | SAMN05216248_101279 | Not Available | Positive | 293191 - 293781 | 21125.8 |
| leucine rich repeat-containing protein | SAMN05216248_101280 | Not Available | Positive | 293855 - 299749 | 220001.0 |
| cysteine synthase b | SAMN05216248_101281 | Not Available | Positive | 299857 - 300759 | 32424.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
