Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein b | SAMN05216248_101262 | Not Available | Positive | 277674 - 278507 | 30629.7 |
| hypothetical protein | SAMN05216248_101263 | Not Available | Positive | 278558 - 278944 | 13235.2 |
| putative copper resistance protein d | SAMN05216248_101264 | Not Available | Positive | 278941 - 279795 | 30200.0 |
| hypothetical protein | SAMN05216248_101265 | Not Available | Negative | 279792 - 280658 | 33100.7 |
| conserved hypothetical protein | SAMN05216248_101266 | Not Available | Negative | 280724 - 281446 | 25902.2 |
| hypothetical protein | SAMN05216248_101267 | Not Available | Negative | 281654 - 281833 | 6088.33 |
| hypothetical protein | SAMN05216248_101268 | Not Available | Positive | 282156 - 282992 | 31028.2 |
| uncharacterized membrane protein | SAMN05216248_101269 | Not Available | Positive | 283118 - 283516 | 14441.1 |
| nucleobase:cation symporter-1, ncs1 family | SAMN05216248_101270 | Not Available | Positive | 283715 - 285157 | 52562.6 |
| predicted arabinose efflux permease, mfs family | SAMN05216248_101271 | Not Available | Negative | 285069 - 286277 | 41913.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
