Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216248_101252 | Not Available | Negative | 268195 - 268998 | 30155.2 |
| transcriptional regulator, lysr family | SAMN05216248_101253 | Not Available | Negative | 269013 - 269936 | 33975.8 |
| hypothetical protein | SAMN05216248_101254 | Not Available | Positive | 269986 - 270300 | 11298.8 |
| fmn-dependent nadh-azoreductase | SAMN05216248_101255 | Not Available | Positive | 270440 - 271039 | 21702.9 |
| carboxylate/amino acid/amine transporter | SAMN05216248_101256 | Not Available | Positive | 271243 - 272109 | 31869.2 |
| miniconductance mechanosensitive channel | SAMN05216248_101257 | Not Available | Negative | 272141 - 273439 | 48317.5 |
| superfamily ii dna and rna helicase | SAMN05216248_101258 | Not Available | Positive | 273632 - 274978 | 49400.1 |
| hypothetical protein | SAMN05216248_101259 | Not Available | Negative | 275029 - 275304 | 10060.1 |
| hypothetical protein | SAMN05216248_101260 | Not Available | Positive | 275458 - 275847 | 13945.2 |
| copper-resistance protein, copa family | SAMN05216248_101261 | Not Available | Positive | 275975 - 277681 | 63601.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
